The Joker is back with a vengeance, and Neo-Gotham's Dark Knight, Terry McGinnis, needs answers as he stands alone to face the old Gotham's most infamous Clown Prince of Crime.

Five bizarre stories with no apparent connection to one another eventually become intertwined, resulting in surreal circumstances.

Two women, aspiring documentary filmmakers, find themselves trapped in a monster-plagued Tokyo in 2003.

Set in an academy for daughters of the rich and powerful, this murder mystery involves six girls with a dark secret. Literature club chairman Itsumi Shiraishi, has fallen to her death from the school roof. Rumours soon circulate that one of the members of the literature club is the culprit. New chairman and friend of the victim, Sayuri Sumikawa, holds a meeting and asks each member to recount their whereabouts at the time of Itsumi’s death. Who is telling a lie and what really happened to Itsumi?

In a futuristic Tokyo where police have been privatized and bitter self-mutilation is so casual that advertising is often specially geared to the 'cutter' demographic, Ruka is on a mission to avenge her father's assassination. Ruka is a cop from a squad whose goal is to destroy homicidal mutant humans known as 'engineers', that possess the ability to transform any injury to a weapon in and of itself.

J.B. (Lars Bom) - an ultra-talented Webmaster of an illicit cyber-domain known for massive amounts of illegal money transfers is captured and is put under suspicion by the cyber-domain boss named Stoiss (Jørgen Kiil) when an intruder hacks into the system and steals the Stoiss’s money. Stoiss sticks a heart controller device on J.B. and gives him 35 hours to find who took his money or he dies.

In the year 2074, the cybernetics market is dominated by two rival companies: USA's Pinwheel Robotics and Japan's Kobayashi Electronics. Cyborgs are commonplace, used for anything from soldiers to prostitutes. Casella Reese is a prototype cyborg developed for corporate espionage and assassination. She is filled with a liquid explosive called Glass Shadow. Pinwheel plans to eliminate the entire Kobayashi board of directors by using Casella

In the aftermath of a major earthquake, scientists predict that Japan will sink into the sea. As further disasters follow, politicians plead with other countries to take refugees, while scientists struggle to save Japan itself.

An elite superhuman agent must stop a foreign military unit from seizing control of an ancient artifact that holds the key to ultimate power.

When a UFO crashes and releases radiation, the dead begin to rise in a cannibalistic frenzy. A group of soldiers and civilians make their way to a hotel and must fend off the zombie hordes.

The story takes place in the year 2034, two years after the events in Ghost in the Shell: S.A.C. 2nd GIG. Female cyborg Major Motoko Kusanagi has left Public Security Section 9, an elite counter-terrorist and anti-crime unit specializing in cyber-warfare, which has expanded to a team of 20 field operatives with Togusa acting as the field lead.

The year is 2030 and six years have passed since a criminal known only as "The Laughing Man" swept through top medical nanotechnology firms committing acts of cyber-terrorism, kidnapping, and espionage leaving no known suspects. New information is revealed, as Section 9 enters the hunt for a suspect capable of unfathomable actions in this compilation of Stand Alone Complex content.